I suspect that there is a bug or incompatibility if you started with a 9.0 and try to upgrade to 9.03..
We tested the entire upgrade system. In many scenarios and all works well.
Just what you need is replace old files with new and run site.com/install.php In title you can see PHP-Fusion Upgrade and follow the instructions. Thats all.
I did a totally clean install (reset database)
Restored through backup, and now I miss all my users and a couple of panels..
If you use old backup on new PF you will need to upgrade database, not only files.
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